Index / MCP servers / BioCosm

BioCosm MCP server

Connect BioCosm and your agent gets 13 tools, among them find_by_phase, find_by_target, find_related. It answers at https://biocosm-mcp.fly.dev/mcp over streamable HTTP, and it listed its tools to an anonymous client, so no sign-in was needed for that. Our probes reached it 5 of 6 times since 11 September 2026; the last check, on 22 October 2026, succeeded.

Status
Answering
Tools
13
Reliability
5 of 6 checks
Response time
138 ms
Transport
streamable HTTP
Last checked
22 October 2026

Biotech intelligence for AI agents: drugs, targets, diagnostics, PoS estimates, and writeups.

Description as the publisher wrote it.

The 13 tools BioCosm offers

ToolWhat it does
find_by_phaseList drugs/diagnostics at a specific clinical phase.
Inputs: phase, node_type, limit
find_by_targetFind all drugs that target a specific gene/protein.
Inputs: target_gene, limit
find_relatedFind nodes connected to a given node. Three relationship types are derived on-the-fly: - "drug_target": for a drug, the targets it hits (and vice versa for a target node, the drugs that hit it) - "same_company": drugs sharing a company with
Inputs: node_id, link_type, limit
get_company_portfolioGet a company's full drug/diagnostic portfolio from BioCosm.
Inputs: company_name
get_coverageReport BioCosm's actual data coverage so you never mistake missing data for a real-world zero. An empty or absent field on a node means "not in BioCosm's data," never a true zero. BioCosm is AI-generated and may contain errors.
get_nodeGet full details for a single BioCosm node: identity and all name aliases, classification, gene targets and mechanism, therapeutic areas, companies, revenue history where available (sparse: ~100 drugs, mostly blockbusters, as annualized qua
Inputs: node_id
get_node_freshnessGet freshness details for a single node: writeup age, enrichment hash match, staleness score, validation score.
Inputs: node_id
get_pos_scoreGet the Probability of Success estimate for a node, including the base rate, adjustment factors with reasoning, confidence interval, and model version. Returns None for nodes without a PoS score (typically only late-stage pipeline drugs are
Inputs: node_id
get_staleness_reportGet writeup staleness report: overall stats, top stale nodes, data source freshness.
Inputs: limit
get_statsGet a high-level overview of the BioCosm database: total nodes, writeups, companies, breakdowns by type/status/domain, validation scores, and recent pipeline runs.
get_writeupGet the full writeup for a BioCosm node, including all sections, citations, structured data, and validation score.
Inputs: node_id
list_by_therapeutic_areaList all nodes in a given therapeutic area.
Inputs: area, limit
search_nodesSearch BioCosm nodes by name, gene symbol, target, therapeutic area, or company. Results are ranked: exact name/brand matches first, then partial name matches, with a node-type prior (canonical drug/diagnostic nodes rank above gene-target n
Inputs: query, limit

Add BioCosm to your AI client

Every block below points at https://biocosm-mcp.fly.dev/mcp. Pick your client and copy.

Claude Code: one command in your terminal
claude mcp add --transport http biocosm https://biocosm-mcp.fly.dev/mcp
Claude Desktop: claude_desktop_config.json
{
  "mcpServers": {
    "biocosm": {
      "command": "npx",
      "args": ["-y", "mcp-remote", "https://biocosm-mcp.fly.dev/mcp"]
    }
  }
}
Cursor: ~/.cursor/mcp.json, or .cursor/mcp.json in a project
{
  "mcpServers": {
    "biocosm": {
      "url": "https://biocosm-mcp.fly.dev/mcp"
    }
  }
}
VS Code and GitHub Copilot: .vscode/mcp.json
{
  "servers": {
    "biocosm": {
      "type": "http",
      "url": "https://biocosm-mcp.fly.dev/mcp"
    }
  }
}
Zed: Zed settings.json
{
  "context_servers": {
    "biocosm": {
      "url": "https://biocosm-mcp.fly.dev/mcp"
    }
  }
}
Windsurf: ~/.codeium/mcp_config.json
{
  "mcpServers": {
    "biocosm": {
      "serverUrl": "https://biocosm-mcp.fly.dev/mcp"
    }
  }
}
JetBrains AI Assistant: Settings, Tools, AI Assistant, MCP, New MCP Server, as JSON
{
  "mcpServers": {
    "biocosm": {
      "url": "https://biocosm-mcp.fly.dev/mcp"
    }
  }
}
Continue: .continue/mcpServers/neuronto.yaml
name: BioCosm
version: 0.0.1
schema: v1
mcpServers:
  - name: BioCosm
    type: streamable-http
    url: https://biocosm-mcp.fly.dev/mcp
Gemini CLI: ~/.gemini/settings.json
{
  "mcpServers": {
    "biocosm": {
      "httpUrl": "https://biocosm-mcp.fly.dev/mcp"
    }
  }
}
Codex CLI: MCP server config
{
  "mcpServers": {
    "biocosm": {
      "type": "http",
      "url": "https://biocosm-mcp.fly.dev/mcp"
    }
  }
}
Warp: MCP servers, + Add, paste JSON
{
  "mcpServers": {
    "biocosm": {
      "url": "https://biocosm-mcp.fly.dev/mcp"
    }
  }
}
Goose: a one-click extension link
goose://extension?url=https%3A%2F%2Fbiocosm-mcp.fly.dev%2Fmcp&type=streamable_http&id=biocosm&name=BioCosm

Is BioCosm up right now?

It answered our last check on 22 October 2026 in 138 ms. Over 6 checks since 11 September 2026 it answered 5. Status here comes from Neuronto's own probes, not from the publisher.

MCP servers similar to BioCosm

Questions about BioCosm

How many tools does BioCosm have?

13, as returned by the server's own tools/list on 27 September 2026: find_by_phase, find_by_target, find_related, get_company_portfolio, get_coverage, get_node, get_node_freshness, get_pos_score, and 5 more.

Is BioCosm down?

It answered our last check on 22 October 2026 in 138 ms. Over 6 checks since 11 September 2026 it answered 5.

How do I add BioCosm to Cursor?

Put the server under mcpServers in ~/.cursor/mcp.json with the URL https://biocosm-mcp.fly.dev/mcp. The exact JSON is above, with the same setup for Claude Code, Claude Desktop, VS Code, Windsurf, Zed, Gemini CLI and the rest.

Does BioCosm need an API key?

It listed its tools to an anonymous client, so reading the tool list needs no key. Individual tools can still ask for credentials in their own inputs.

Where this comes from

Publisher: io.github.nhoverte. Endpoint host: biocosm-mcp.fly.dev. ARD identifier: urn:air:io.github.nhoverte:mcp:biocosm. First indexed 10 September 2026. The tools are exactly what the server returned; nothing on this page is inferred from its name. Ranking in Neuronto search is never for sale.

Is this your server? Get a message the day it stops answering or its tools change: monitoring, 14 days free. Or claim the domain to manage how it is listed.